Installation netcdf4 : Différence entre versions
(Created page with "Installing the required dependencies There are only two dependencies to install, HDF5 (>=1.8.2) and netCDF4. The version of HDF5 shipped with Karmic is 1.6.6, so you'll need to c...") |
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| − | Installing the required dependencies | + | Installing the required dependencies There are only two dependencies to install, HDF5 (>=1.8.2) and netCDF4. The version of HDF5 shipped with Karmic is 1.6.6, so you'll need to compile from source. Lucid will ship with 1.8.3 so that won't be necessary, but until then, read on. |
| − | There are only two dependencies to install, HDF5 ( | + | |
| + | HDF5 Download the current HDF5 source release. | ||
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Unpack, go into the directory and execute: | Unpack, go into the directory and execute: | ||
./configure --prefix=/usr/local --enable-shared --enable-hl | ./configure --prefix=/usr/local --enable-shared --enable-hl | ||
make | make | ||
sudo make install | sudo make install | ||
| − | To speed things up, compile on more than one processor using | + | |
| + | To speed things up, compile on more than one processor using | ||
make -j n | make -j n | ||
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| − | netCDF4 | + | where n is the number of processes to be launched. |
| − | Download the current netCDF4 source release. | + | |
| − | Unpack, go into the directory and execute: | + | netCDF4 Download the current netCDF4 source release. Unpack, go into the directory and execute: |
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LDFLAGS=-L/usr/local/lib CPPFLAGS=-I/usr/local/include ./configure --enable-netcdf-4 --enable-dap --enable-shared --prefix=/usr/local | LDFLAGS=-L/usr/local/lib CPPFLAGS=-I/usr/local/include ./configure --enable-netcdf-4 --enable-dap --enable-shared --prefix=/usr/local | ||
make | make | ||
make install | make install | ||
| + | <br> | ||
When both HDF5 and netCDF4 are in /usr/local, make sure the linker will be able to find those libraries by executin | When both HDF5 and netCDF4 are in /usr/local, make sure the linker will be able to find those libraries by executin | ||
pip install netcdf4 | pip install netcdf4 | ||
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| + | Install via Anaconda. | ||
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| + | Obtenir Anaconda au lien suivant selon la plateforme: | ||
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| + | https://www.continuum.io/downloads | ||
| + | Choisir la version désirée, télécharger et rendre executable par chmod. | ||
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| + | faire ./Anaconda2-4.0.0-Linux-x86_64.sh (ne pas copier exemple mais prendre nom du fichier téléchargé du site web) | ||
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| + | Une fois Anaconda installé dans le compte de l'usager, faire "% conda install netcdf4 | ||
Version actuelle datée du 20 de juin 2016 à 19:21
Installing the required dependencies There are only two dependencies to install, HDF5 (>=1.8.2) and netCDF4. The version of HDF5 shipped with Karmic is 1.6.6, so you'll need to compile from source. Lucid will ship with 1.8.3 so that won't be necessary, but until then, read on.
HDF5 Download the current HDF5 source release.
Unpack, go into the directory and execute: ./configure --prefix=/usr/local --enable-shared --enable-hl make sudo make install
To speed things up, compile on more than one processor using
make -j n
where n is the number of processes to be launched.
netCDF4 Download the current netCDF4 source release. Unpack, go into the directory and execute:
LDFLAGS=-L/usr/local/lib CPPFLAGS=-I/usr/local/include ./configure --enable-netcdf-4 --enable-dap --enable-shared --prefix=/usr/local make make install
When both HDF5 and netCDF4 are in /usr/local, make sure the linker will be able to find those libraries by executin
pip install netcdf4
Install via Anaconda.
Obtenir Anaconda au lien suivant selon la plateforme: https://www.continuum.io/downloads Choisir la version désirée, télécharger et rendre executable par chmod. faire ./Anaconda2-4.0.0-Linux-x86_64.sh (ne pas copier exemple mais prendre nom du fichier téléchargé du site web)
Une fois Anaconda installé dans le compte de l'usager, faire "% conda install netcdf4
