Logiciels sur les serveurs

en construction(cette page s'adresse aux installateurs)

under construction(this page is for installers)

serveurs

• CentOS 6 / RHEL 6
  • st2
  • beluga
• CentOS 7
  • robert
  • zwack
  • snow
  • glacier

/sca

• /sca/modulefiles (modules pour GNU modules)
• /sca/compilers_and_tools (compilateurs et logiciels utilitaires installés avec GNU modules)
  • ifort/icc (Intel compilers)
    • 16.0.1 + openmpi-2.1.5
    • 18.0.5 + openmpi-2.1.5
    • 19.0.1 + openmpi-2.1.5
  • gfortran/gcc (GNU compilers)
    • 7.3.0 + openmpi-2.1.5
  • pgf90/pgcc (PGI compilers)
  • flang/clang
    • 6.0.1
  • netcdf
  • cdo, ncview

export PREFIX=/sca/compilers_and_tools/cdo
export CPPFLAGS=-I$PREFIX/include
export LDFLAGS=-L$PREFIX/lib

libraries for cdo as found on cdo site
/sca/compilers_and_tools/sources/libs4cdo-0.0.11.tar.xz
(using ./configure ... ; make ; make check ; make install )

szip functionality
aec 1.0.2+patch /sca/compilers_and_tools/sources/libaec-1.0.2.tar.gz  (alternative 1)
./configure --prefix=$PREFIX
szip 2.1 libs4cdo-0.0.11/szip-2.1  (alternative 2)
./configure --prefix=$PREFIX --enable-production

udunits2 2.2.26 /sca/compilers_and_tools/sources/udunits-2.2.26.tar.gz
# must add #define XML_STATUS_OK    1 after #include "expat.h" in lib/xml.c
./configure --prefix=$PREFIX --with-pic=yes

export CPPFLAGS=$PREFIX/include
export LDFLAGS=$PREFIX/lib

hdf5 1.8.21 /sca/compilers_and_tools/sources/hdf5-1.8.21.tar.bz2
hdf5 1.8.15 libs4cdo-0.0.11/hdf5-1.8.15
#./configure --prefix=$PREFIX --enable-shared --with-szlib --enable-hl --disable-cxx --disable-fortran --enable-threadsafe --with-pthread --with-zlib
./configure --prefix=$PREFIX --enable-shared --with-szlib=$PREFIX --disable-cxx --disable-fortran --enable-threadsafe --with-pthread --with-zlib

netcdf 4.3.3.1 libs4cdo-0.0.11/netcdf-4.3.3.1
./configure --prefix=$PREFIX --enable-shared --enable-netcdf-4

jasper 1.900.29 /sca/compilers_and_tools/sources/jasper-1.900.29.tar.gz
jasper 1.900.1 libs4cdo-0.0.11/jasper-1.900.1
./configure --prefix=$PREFIX --enable-shared

grib_api 1.13.1 /sca/compilers_and_tools/sources/grib_api-1.13.1.tar.gz libs4cdo-0.0.11/grib_api-1.13.1
./configure --prefix=$PREFIX --with-jasper=$PREFIX --disable-fortran

proj 4.8.0 libs4cdo-0.0.11/proj-4.8.0
./configure --prefix=$PREFIX --without-mutex --without-jni

cdo 1.9.5 /sca/compilers_and_tools/sources/cdo-1.9.5.tar.gz (module load compiler/gcc-7.3)
./configure --prefix=$PREFIX --with-szlib --with-netcdf --with-proj --with-grib_api --with-udunits2 --with-threads --disable-fortran

ncview 2.1.7 /sca/compilers_and_tools/sources/ncview-2.1.7.tar.gz (will need to get libpng and liggsl sources for all platforms version)
./configure --prefix=$PREFIX 

• /sca/armnssm (environnement logiciel pour les modèles, accès avec l'utilitaire ssm)